We fit archival near-IR spectra of ~300 brown dwarfs with atmosphere models from the Sonora and Phoenix groups. Using the parameters of the best- fit models as estimates for the physical properties of the brown dwarfs in our sample, we have performed a survey of how brown dwarf atmospheres evolve with spectral type and temperature. We present the fit results and observed trends. We find that clouds have a more significant impact on near-IR spectra than disequilibrium chemistry, and that silicate clouds influence the near-IR spectrum through the late T types. We note where current atmosphere models are able to replicate the data and where the models and data conflict. We also categorize objects with similar spectral morphologies into families and discuss possible causes for their unique spectral traits. We identify two spectral families with morphologies that are likely indicative of binarity.