In the current era of large spectroscopic surveys of the Milky Way, reference stars for calibrating astrophysical parameters and chemical abundances are of paramount importance. We determine elemental abundances of Mg, Si, Ca, Sc, Ti, V, Cr, Mn, Co, and Ni for our predefined set of Gaia FGK benchmark stars. By analysing high-resolution spectra with a high signal-to-noise ratio taken from several archive datasets, we combined results of eight different methods to determine abundances on a line-by-line basis. We performed a detailed homogeneous analysis of the systematic uncertainties, such as differential versus absolute abundance analysis. We also assessed errors that are due to non-local thermal equilibrium and the stellar parameters in our final abundances.